You can use FTDI Basic for easy programming MultiWii or other controller.

Tools must be used with FTDI. Please purchase it before you can make changes to the flight control program /upload, and adjust the parameters

   
FTDI Basic Breakout Arduino USB-TTL 6 PIN 3.3 5V for MultiWii. With programer connector

This is the newest revision of our FTDI BASIC. It now uses a SMD 6-pin header on the bottom, which makes it smaller and more compact.

This is a basic breakout board for the FTDI FT232RL USB to serial IC. The pinout of this board matches the FTDI cable to work with official Arduino and cloned 5V Arduino boards. It can also be used for general serial applications. The major difference with this board is that it brings out the DTR pin as opposed to the RTS pin of the FTDI cable. The DTR pin allows an Arduino target to auto-reset when a new Sketch is downloaded. This is a really nice feature to have and allows a sketch to be downloaded without having to hit the reset button. This board will auto reset any Arduino board that has the reset pin brought out to a 6-pin connector.

The pins labeled BLK and GRN correspond to the colored wires on the FTDI cable. The black wire on the FTDI cable is GND, green is CTS. Use these BLK and GRN pins to align the FTDI basic board with your Arduino target.

This board has TX and RX LEDs that make it a bit better to use over the FTDI cable. You can actually see serial traffic on the LEDs to verify if the board is working.

One of the nice features of this board is a jumper on the back of the board that allows the board to be configured to either 3.3V or 5V (both power output and IO level). This board ship default to 5V, but you can cut the default trace and add a solder jumper if you need to switch to 3.3V.